Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Shmt1P50431 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm15971-201ENSMUST00000119372 211 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm4234-201ENSMUST00000119747 714 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm13489-201ENSMUST00000121234 971 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.19□□□□□ -1.42
Shmt1P50431 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm22492-201ENSMUST00000157192 297 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm24731-201ENSMUST00000158227 131 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Shmt1P50431 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.19□□□□□ -1.42
Shmt1P50431 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Shmt1P50431 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm6680-201ENSMUST00000192789 950 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm43779-201ENSMUST00000196691 829 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm43004-201ENSMUST00000201872 703 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC6.19□□□□□ -1.42
Shmt1P50431 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm7890-201ENSMUST00000204877 601 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm44665-201ENSMUST00000205381 251 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm32300-201ENSMUST00000221735 515 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Shmt1P50431 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Gm25810-201ENSMUST00000082752 108 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Shmt1P50431 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm14445-201ENSMUST00000117051 1484 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.19□□□□□ -1.42
Shmt1P50431 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.18□□□□□ -1.42
Shmt1P50431 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm2003-201ENSMUST00000118537 636 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm14975-201ENSMUST00000118741 664 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm14679-201ENSMUST00000121536 722 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm12293-201ENSMUST00000121898 590 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm1989-201ENSMUST00000126244 636 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.18□□□□□ -1.42
Shmt1P50431 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm17655-201ENSMUST00000167969 255 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Mir3572-201ENSMUST00000175549 86 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm27849-201ENSMUST00000183673 125 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm43582-201ENSMUST00000196149 343 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm42976-201ENSMUST00000200313 222 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm5317-201ENSMUST00000204445 847 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.18□□□□□ -1.42
Shmt1P50431 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm17988-201ENSMUST00000208796 535 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm5339-201ENSMUST00000210551 1102 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC6.18□□□□□ -1.42
Shmt1P50431 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.18□□□□□ -1.42
Shmt1P50431 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC6.18□□□□□ -1.42
Shmt1P50431 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Gm18026-201ENSMUST00000222789 727 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shmt1P50431 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shmt1P50431 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shmt1P50431 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shmt1P50431 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Shmt1P50431 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Shmt1P50431 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.18□□□□□ -1.42
Shmt1P50431 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms