Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm15950-201ENSMUST00000162902 1973 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Gm11833-201ENSMUST00000118393 853 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Gm24188-201ENSMUST00000157980 108 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cxcl12P40224 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 Mir7685-201ENSMUST00000183555 62 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 Gm23925-202ENSMUST00000188429 132 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.57□□□□□ -1.52
Cxcl12P40224 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 AC153936.1-201ENSMUST00000219874 395 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cxcl12P40224 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.57□□□□□ -1.52
Cxcl12P40224 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.57□□□□□ -1.52
Cxcl12P40224 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cxcl12P40224 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm5084-202ENSMUST00000224064 3609 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cxcl12P40224 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cxcl12P40224 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cxcl12P40224 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cxcl12P40224 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm22266-201ENSMUST00000104011 138 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm16082-201ENSMUST00000115992 377 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm12884-201ENSMUST00000120371 325 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm14125-202ENSMUST00000120921 756 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cxcl12P40224 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cxcl12P40224 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm23872-201ENSMUST00000175432 77 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm20614-201ENSMUST00000177106 632 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm29474-201ENSMUST00000187688 379 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm7721-201ENSMUST00000200446 546 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm45610-201ENSMUST00000209227 784 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Gm8942-201ENSMUST00000217892 400 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cxcl12P40224 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.56□□□□□ -1.52
Cxcl12P40224 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cxcl12P40224 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms