Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm23762-201ENSMUST00000158348 106 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm18343-201ENSMUST00000172802 604 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm28586-201ENSMUST00000189857 456 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm37475-201ENSMUST00000193107 1015 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Igkv4-73-201ENSMUST00000199760 358 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm8319-201ENSMUST00000205708 641 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC4.27□□□□□ -1.73
Hmgb3O54879 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm272-201ENSMUST00000222073 919 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm18620-201ENSMUST00000222295 324 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 AC107757.1-201ENSMUST00000226780 357 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm25515-201ENSMUST00000083858 157 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 AC154368.2-201ENSMUST00000222334 1724 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm11278-201ENSMUST00000121002 997 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 n-R5s19-201ENSMUST00000122793 120 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm24675-201ENSMUST00000158757 259 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm24812-201ENSMUST00000175315 284 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm21959-201ENSMUST00000178439 452 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm21839-201ENSMUST00000179536 378 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm5946-201ENSMUST00000182340 970 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm28507-201ENSMUST00000189737 703 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm43516-201ENSMUST00000196891 322 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm1969-201ENSMUST00000198125 1220 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm43717-201ENSMUST00000198684 310 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm44312-201ENSMUST00000203536 469 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm4874-201ENSMUST00000203589 691 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm45525-201ENSMUST00000210800 389 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 AC126554.2-201ENSMUST00000223259 400 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 AC122393.2-201ENSMUST00000226404 1093 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmgb3O54879 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.26□□□□□ -1.73
Hmgb3O54879 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hmgb3O54879 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms