Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm9429-201ENSMUST00000117804 868 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm8595-201ENSMUST00000118250 630 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm11774-201ENSMUST00000118601 293 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm13488-201ENSMUST00000120419 179 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm14998-201ENSMUST00000120502 495 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm14601-201ENSMUST00000120892 236 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm7335-201ENSMUST00000172475 373 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Mir7087-201ENSMUST00000184840 70 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm18325-201ENSMUST00000203228 835 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Clec2j-202ENSMUST00000203658 606 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm9278-201ENSMUST00000205508 553 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm45405-201ENSMUST00000211544 609 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm19186-201ENSMUST00000219922 333 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm18940-201ENSMUST00000222518 871 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 AV026068-231ENSMUST00000225862 482 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 AC154838.2-201ENSMUST00000226602 747 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm23839-201ENSMUST00000116957 109 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm14472-201ENSMUST00000119815 282 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm11677-201ENSMUST00000121349 977 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm11894-201ENSMUST00000121579 328 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm14126-201ENSMUST00000122345 395 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm23233-201ENSMUST00000157301 137 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Scarna6-201ENSMUST00000158656 265 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm20397-201ENSMUST00000174520 362 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm3307-201ENSMUST00000176164 632 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Mir6903-201ENSMUST00000183597 88 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm27355-201ENSMUST00000185045 128 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm18007-201ENSMUST00000205019 844 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm3257-201ENSMUST00000207217 675 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Clec2j-201ENSMUST00000032517 515 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Srp54bE9PXC0 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Srp54bE9PXC0 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms