Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Mir546-201ENSMUST00000102105 121 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm11270-201ENSMUST00000117685 471 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm11908-201ENSMUST00000117755 347 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm12768-201ENSMUST00000120055 759 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm15044-201ENSMUST00000120703 598 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm6175-201ENSMUST00000121351 400 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm15022-201ENSMUST00000122074 746 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm16139-201ENSMUST00000160015 420 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm28923-201ENSMUST00000187755 322 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm17952-201ENSMUST00000193914 747 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm43516-201ENSMUST00000196891 322 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm18702-201ENSMUST00000196923 588 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm9480-201ENSMUST00000198038 616 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm45026-201ENSMUST00000205292 833 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm9278-201ENSMUST00000205508 553 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm4587-201ENSMUST00000209135 637 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 AC105169.1-201ENSMUST00000218912 1294 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.16□□□□□ -1.58
Trim3Q9R1R2 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim3Q9R1R2 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.15□□□□□ -1.58
Trim3Q9R1R2 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.15□□□□□ -1.58
Trim3Q9R1R2 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.15□□□□□ -1.58
Trim3Q9R1R2 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.15□□□□□ -1.58
Trim3Q9R1R2 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Trim3Q9R1R2 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.15□□□□□ -1.58
Trim3Q9R1R2 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Trim3Q9R1R2 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Trim3Q9R1R2 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Trim3Q9R1R2 Gm22592-201ENSMUST00000104242 131 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm7189-201ENSMUST00000119811 429 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm22993-201ENSMUST00000175423 254 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms