Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm7733-201ENSMUST00000199038 919 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm19174-201ENSMUST00000216944 956 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm4012-201ENSMUST00000221504 581 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm10221-201ENSMUST00000088299 309 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Smc5-206ENSMUST00000226111 3265 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm4989-201ENSMUST00000118711 749 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm12482-201ENSMUST00000120435 630 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm26372-201ENSMUST00000157831 236 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm23774-201ENSMUST00000158990 131 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm3170-201ENSMUST00000168753 850 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm3348-201ENSMUST00000177813 850 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm37203-201ENSMUST00000191618 385 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm2429-201ENSMUST00000194635 586 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm43516-201ENSMUST00000196891 322 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm4874-201ENSMUST00000203589 691 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm16335-201ENSMUST00000077495 309 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Mir298-201ENSMUST00000083476 82 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lima1Q9ERG0 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Lima1Q9ERG0 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.21□□□□□ -1.57
Lima1Q9ERG0 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Lima1Q9ERG0 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Lima1Q9ERG0 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm26078-201ENSMUST00000104067 128 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm24235-201ENSMUST00000104319 129 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm22210-201ENSMUST00000158101 144 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm17907-201ENSMUST00000173150 710 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm21909-201ENSMUST00000178260 439 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm27024-201ENSMUST00000182561 755 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm28883-201ENSMUST00000189256 369 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm37308-201ENSMUST00000194684 100 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm43078-201ENSMUST00000197222 168 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm4742-201ENSMUST00000200261 771 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm44412-201ENSMUST00000203018 294 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm45422-201ENSMUST00000211476 246 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms