Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Rrp8Q9DB85 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.36□□□□□ -1.55
Rrp8Q9DB85 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.36□□□□□ -1.55
Rrp8Q9DB85 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Rrp8Q9DB85 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Rrp8Q9DB85 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.36□□□□□ -1.55
Rrp8Q9DB85 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Rrp8Q9DB85 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Rrp8Q9DB85 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Rrp8Q9DB85 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm15400-201ENSMUST00000118944 601 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm15971-201ENSMUST00000119372 211 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm14998-201ENSMUST00000120502 495 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm25293-201ENSMUST00000122792 285 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm8256-201ENSMUST00000169178 453 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm8480-201ENSMUST00000190350 698 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm42542-201ENSMUST00000197978 268 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm9173-201ENSMUST00000198054 400 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm40598-201ENSMUST00000222953 547 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Snord15b-201ENSMUST00000083032 145 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm25139-201ENSMUST00000083247 210 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rrp8Q9DB85 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm7206-201ENSMUST00000117730 508 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm12444-201ENSMUST00000121512 877 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm3242-201ENSMUST00000171273 485 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm19029-201ENSMUST00000189923 564 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.34□□□□□ -1.55
Rrp8Q9DB85 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Rrp8Q9DB85 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Rrp8Q9DB85 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.34□□□□□ -1.56
Rrp8Q9DB85 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Rrp8Q9DB85 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Rrp8Q9DB85 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Rrp8Q9DB85 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Rrp8Q9DB85 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Rrp8Q9DB85 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Rrp8Q9DB85 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.34□□□□□ -1.56
Rrp8Q9DB85 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Rrp8Q9DB85 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms