Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm7206-201ENSMUST00000117730 508 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm14769-201ENSMUST00000118590 432 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm14712-201ENSMUST00000120195 772 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm7571-201ENSMUST00000120252 927 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm14998-201ENSMUST00000120502 495 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm22223-201ENSMUST00000157360 125 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm27998-201ENSMUST00000184902 361 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm44234-201ENSMUST00000204246 900 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm8209-201ENSMUST00000206386 553 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm8556-201ENSMUST00000210437 664 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 AC162376.1-201ENSMUST00000220120 435 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm43369-201ENSMUST00000196373 1552 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm7451-201ENSMUST00000208382 1392 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm44224-201ENSMUST00000204131 1463 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm43443-201ENSMUST00000202337 2393 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm13770-201ENSMUST00000117149 305 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm12889-201ENSMUST00000118684 241 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Klra14-ps-201ENSMUST00000119532 802 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm15786-201ENSMUST00000121079 450 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm8317-201ENSMUST00000121261 471 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 V1rg10-201ENSMUST00000183378 937 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm5058-201ENSMUST00000187331 463 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm37837-201ENSMUST00000191743 604 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm37219-201ENSMUST00000192036 926 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm37189-201ENSMUST00000192131 298 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm7299-201ENSMUST00000194441 581 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm35013-201ENSMUST00000197218 832 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm44382-201ENSMUST00000198683 122 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm44316-201ENSMUST00000199274 97 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm45156-201ENSMUST00000207255 439 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 CT573422.1-201ENSMUST00000216655 405 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 AC139638.1-201ENSMUST00000218027 364 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 Gm18955-201ENSMUST00000223173 649 ntBASIC6.29□□□□□ -1.4
Ddx56Q9D0R4 AC132881.2-201ENSMUST00000225474 709 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms