Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm1866-201ENSMUST00000120701 477 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm13363-201ENSMUST00000122008 522 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm15534-201ENSMUST00000137642 562 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm25363-201ENSMUST00000158850 245 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm15508-201ENSMUST00000160330 325 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Mir7211-201ENSMUST00000184071 63 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm28871-201ENSMUST00000186191 687 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm28149-201ENSMUST00000187102 378 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm28768-201ENSMUST00000189034 378 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm18553-201ENSMUST00000194152 634 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Mir219c-201ENSMUST00000199860 60 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm34701-202ENSMUST00000204685 360 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.75□□□□□ -1.33
Brf1Q8CFK2 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm20574-201ENSMUST00000182867 917 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm37308-201ENSMUST00000194684 100 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm38154-201ENSMUST00000195444 340 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm43516-201ENSMUST00000196891 322 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm18702-201ENSMUST00000196923 588 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm43992-201ENSMUST00000204358 197 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Brf1Q8CFK2 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm6545-201ENSMUST00000217186 1786 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms