Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm18011-201ENSMUST00000203717 565 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3257-201ENSMUST00000207217 675 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm46223-201ENSMUST00000215196 675 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm26078-201ENSMUST00000104067 128 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm13772-201ENSMUST00000118431 317 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm11742-201ENSMUST00000119903 233 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm13259-201ENSMUST00000120792 456 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm16260-201ENSMUST00000155141 304 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm26372-201ENSMUST00000157831 236 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm23964-201ENSMUST00000157966 107 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm23224-201ENSMUST00000158122 271 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm6717-201ENSMUST00000185549 838 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm6693-201ENSMUST00000189583 813 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm37609-201ENSMUST00000191778 678 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm45845-201ENSMUST00000207326 582 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm45422-201ENSMUST00000211476 246 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm10108-201ENSMUST00000078246 319 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Gm25818-201ENSMUST00000083282 164 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.48□□□□□ -1.53
Ccdc28aQ8CEI3 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm22372-201ENSMUST00000104589 136 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm11902-201ENSMUST00000118849 270 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm27688-201ENSMUST00000183634 91 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm2914-201ENSMUST00000186120 328 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm8920-201ENSMUST00000196153 924 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm6261-201ENSMUST00000204707 760 ntBASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28aQ8CEI3 LOC665443-201ENSMUST00000212284 796 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms