Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm8424-201ENSMUST00000117716 988 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm15741-201ENSMUST00000119401 754 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm5125-201ENSMUST00000148614 624 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm23027-201ENSMUST00000158771 158 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm4134-201ENSMUST00000173244 563 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm15257-201ENSMUST00000177680 883 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm15252-201ENSMUST00000177750 883 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm15260-201ENSMUST00000179402 883 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Mir7005-201ENSMUST00000185089 69 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm8480-201ENSMUST00000190350 698 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm44548-201ENSMUST00000208929 192 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm18996-201ENSMUST00000214851 755 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 AL837512.1-201ENSMUST00000223914 1073 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm11970-201ENSMUST00000116105 320 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm14756-201ENSMUST00000116395 240 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm12931-201ENSMUST00000117046 324 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm12939-201ENSMUST00000117303 165 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm13724-201ENSMUST00000122395 1155 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm23149-201ENSMUST00000158837 230 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm24179-201ENSMUST00000158925 127 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm22993-201ENSMUST00000175423 254 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm21909-201ENSMUST00000178260 439 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm21542-201ENSMUST00000182307 993 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm43444-201ENSMUST00000198123 291 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm43015-201ENSMUST00000199087 565 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm43772-201ENSMUST00000202052 379 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm44237-201ENSMUST00000205183 936 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm5418-201ENSMUST00000206932 528 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm19900-201ENSMUST00000207285 576 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc28bQ8CEG5 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc28bQ8CEG5 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms