Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm14871-201ENSMUST00000119056 194 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm23082-201ENSMUST00000157852 133 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Scarna6-201ENSMUST00000158656 265 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm22122-201ENSMUST00000175147 200 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm22698-201ENSMUST00000175375 108 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm24407-201ENSMUST00000177864 141 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm29376-201ENSMUST00000189357 835 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm38360-201ENSMUST00000195130 454 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm38384-201ENSMUST00000195413 1122 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm6543-201ENSMUST00000197353 808 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm4587-201ENSMUST00000209135 637 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.4□□□□□ -1.38
Nup88Q8CEC0 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.4□□□□□ -1.39
Nup88Q8CEC0 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Nup88Q8CEC0 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Nup88Q8CEC0 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
Nup88Q8CEC0 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.4□□□□□ -1.39
Nup88Q8CEC0 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Nup88Q8CEC0 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.4□□□□□ -1.39
Nup88Q8CEC0 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.4□□□□□ -1.39
Nup88Q8CEC0 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm23839-201ENSMUST00000116957 109 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm11774-201ENSMUST00000118601 293 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm6427-201ENSMUST00000118721 979 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm11826-201ENSMUST00000118781 438 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm12281-201ENSMUST00000119536 298 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm12074-201ENSMUST00000120189 219 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm16420-201ENSMUST00000120258 856 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm11894-201ENSMUST00000121579 328 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm16260-201ENSMUST00000155141 304 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm24940-201ENSMUST00000158326 108 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm3216-201ENSMUST00000166927 486 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm3141-201ENSMUST00000168726 499 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm8604-201ENSMUST00000183150 965 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Mir6417-201ENSMUST00000183815 116 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Mir6516-201ENSMUST00000196236 110 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm9317-201ENSMUST00000197055 862 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm44132-201ENSMUST00000205142 151 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm6474-201ENSMUST00000223250 699 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 AC154838.2-201ENSMUST00000226602 747 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Nup88Q8CEC0 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Mir1188-201ENSMUST00000116756 120 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm13681-201ENSMUST00000117925 210 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm8595-201ENSMUST00000118250 630 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms