Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm25152-201ENSMUST00000157117 114 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm6808-201ENSMUST00000162341 807 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm16531-201ENSMUST00000180658 967 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm27266-201ENSMUST00000184521 123 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm27160-201ENSMUST00000184837 199 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm37072-201ENSMUST00000194570 837 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm8719-201ENSMUST00000203602 534 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm45596-201ENSMUST00000209279 434 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Mir143-201ENSMUST00000083511 63 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Lrif1Q8CDD9 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm6427-201ENSMUST00000118721 979 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm12413-201ENSMUST00000121508 312 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm23280-201ENSMUST00000157905 139 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm25227-201ENSMUST00000158204 112 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm22530-201ENSMUST00000158820 118 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm22326-201ENSMUST00000158897 351 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm27030-201ENSMUST00000182551 464 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm27820-201ENSMUST00000183628 175 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Mir7653-201ENSMUST00000184358 61 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm27409-201ENSMUST00000184727 80 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Mir7674-201ENSMUST00000184964 63 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm37030-201ENSMUST00000194254 295 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm9480-201ENSMUST00000198038 616 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 LOC665443-201ENSMUST00000212284 796 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 AV026068-237ENSMUST00000226075 572 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
Lrif1Q8CDD9 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms