Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm44582-201ENSMUST00000209125 445 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm24350-201ENSMUST00000104163 133 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm23450-201ENSMUST00000178285 91 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm27820-201ENSMUST00000183628 175 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm27225-201ENSMUST00000183833 557 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Mir7087-201ENSMUST00000184840 70 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm29664-201ENSMUST00000191125 463 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Mir449a-201ENSMUST00000083641 91 ntBASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trub1Q8C0D0 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Gm12768-201ENSMUST00000120055 759 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Gm12074-201ENSMUST00000120189 219 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Gm24295-201ENSMUST00000158298 131 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Gm27409-201ENSMUST00000184727 80 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Gm5285-201ENSMUST00000193089 666 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Gm9332-201ENSMUST00000198431 730 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Gm45874-201ENSMUST00000212423 346 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.43□□□□□ -1.54
Trub1Q8C0D0 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trub1Q8C0D0 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms