Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Foxc1Q61572 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Foxc1Q61572 CR974429.2-201ENSMUST00000221883 1696 ntBASIC5.66□□□□□ -1.5
Foxc1Q61572 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Foxc1Q61572 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Foxc1Q61572 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Foxc1Q61572 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Foxc1Q61572 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm43123-201ENSMUST00000201893 3471 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Fus-202ENSMUST00000079045 2623 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm17229-202ENSMUST00000166792 1753 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm12344-201ENSMUST00000117087 329 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm12765-201ENSMUST00000117273 615 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm11268-201ENSMUST00000118347 267 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm11922-201ENSMUST00000118967 475 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm11890-201ENSMUST00000119585 417 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm13259-201ENSMUST00000120792 456 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm12692-201ENSMUST00000121092 546 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm12693-201ENSMUST00000121965 483 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm11688-201ENSMUST00000122145 308 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm15187-201ENSMUST00000122329 264 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC5.65□□□□□ -1.5
Foxc1Q61572 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Scarna17-201ENSMUST00000158064 79 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm25718-201ENSMUST00000158632 118 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm25365-201ENSMUST00000158852 121 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm24738-201ENSMUST00000158856 123 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm8304-201ENSMUST00000185744 584 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm5853-201ENSMUST00000197183 632 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm43471-201ENSMUST00000197550 467 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm42767-201ENSMUST00000198583 632 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.65□□□□□ -1.5
Foxc1Q61572 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC5.65□□□□□ -1.5
Foxc1Q61572 AC154747.4-202ENSMUST00000223826 852 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Foxc1Q61572 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Gm23515-201ENSMUST00000082829 107 ntBASIC5.65□□□□□ -1.5
Foxc1Q61572 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Foxc1Q61572 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.65□□□□□ -1.5
Foxc1Q61572 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 AC159002.2-201ENSMUST00000228843 4874 ntBASIC5.65□□□□□ -1.51
Foxc1Q61572 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.51
Foxc1Q61572 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
Foxc1Q61572 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.65□□□□□ -1.51
Foxc1Q61572 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Foxc1Q61572 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Foxc1Q61572 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC5.65□□□□□ -1.51
Foxc1Q61572 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Gm21781-201ENSMUST00000178920 4838 ntBASIC5.65□□□□□ -1.51
Foxc1Q61572 AC122769.1-201ENSMUST00000226930 1714 ntBASIC5.65□□□□□ -1.51
Foxc1Q61572 Gm21152-201ENSMUST00000190271 3483 ntBASIC5.65□□□□□ -1.51
Foxc1Q61572 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC5.65□□□□□ -1.51
Foxc1Q61572 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.65□□□□□ -1.51
Foxc1Q61572 Gm37364-201ENSMUST00000192533 3920 ntBASIC5.65□□□□□ -1.51
Foxc1Q61572 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Gm43581-201ENSMUST00000196766 2864 ntBASIC5.65□□□□□ -1.51
Foxc1Q61572 AC144772.2-201ENSMUST00000228830 2859 ntBASIC5.65□□□□□ -1.51
Foxc1Q61572 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Foxc1Q61572 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
Foxc1Q61572 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms