Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm28943-201ENSMUST00000186187 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm28736-201ENSMUST00000186257 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm29401-201ENSMUST00000186690 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm29178-204ENSMUST00000186784 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm28589-201ENSMUST00000186991 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm28936-201ENSMUST00000187153 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm29121-201ENSMUST00000187611 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm28243-201ENSMUST00000187801 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm29159-201ENSMUST00000187969 379 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm28844-202ENSMUST00000187977 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm29058-201ENSMUST00000189510 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm29624-201ENSMUST00000190018 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm28780-201ENSMUST00000190223 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm28969-211ENSMUST00000190992 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm28990-207ENSMUST00000191219 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm36468-201ENSMUST00000192119 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm31572-201ENSMUST00000193341 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm30175-201ENSMUST00000194173 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm30858-201ENSMUST00000195516 615 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm43078-201ENSMUST00000197222 168 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm7733-201ENSMUST00000199038 919 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm44412-201ENSMUST00000203018 294 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm36501-201ENSMUST00000221857 745 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trafd1Q3UDK1 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm16394-201ENSMUST00000117289 675 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm12677-201ENSMUST00000118668 426 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm15044-201ENSMUST00000120703 598 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm25489-201ENSMUST00000158727 141 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm15812-201ENSMUST00000162331 748 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm22411-201ENSMUST00000175462 126 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm22002-201ENSMUST00000175622 125 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm26738-201ENSMUST00000181312 601 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm27887-201ENSMUST00000184367 102 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm27266-201ENSMUST00000184521 123 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm28507-201ENSMUST00000189737 703 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm18541-201ENSMUST00000215935 538 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trafd1Q3UDK1 Gm22456-201ENSMUST00000082578 125 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms