Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm43922-201ENSMUST00000205071 328 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm33601-201ENSMUST00000210001 961 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 AC124356.2-201ENSMUST00000221874 336 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 AC154390.1-201ENSMUST00000225629 277 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 CT009711.4-201ENSMUST00000225685 198 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm23104-201ENSMUST00000083722 104 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm42653-201ENSMUST00000200644 2839 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 AC132336.1-201ENSMUST00000222844 1740 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm26289-201ENSMUST00000104169 131 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm7834-201ENSMUST00000117560 437 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm13455-201ENSMUST00000118767 517 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm14788-201ENSMUST00000119457 375 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 H3f3c-201ENSMUST00000119459 411 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm12734-201ENSMUST00000120228 948 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm15381-201ENSMUST00000121501 1156 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm16412-201ENSMUST00000121602 273 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm14383-201ENSMUST00000121637 386 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm12045-201ENSMUST00000122122 573 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm23343-201ENSMUST00000158964 143 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm25445-201ENSMUST00000158996 299 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm10177-202ENSMUST00000161698 207 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm3339-201ENSMUST00000163462 475 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Mir6398-201ENSMUST00000184541 102 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm27942-201ENSMUST00000184669 101 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm28802-201ENSMUST00000188624 944 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm28413-201ENSMUST00000189369 291 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm28467-201ENSMUST00000190981 318 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm37609-201ENSMUST00000191778 678 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm44003-201ENSMUST00000203024 490 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm5990-201ENSMUST00000203126 746 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm43979-201ENSMUST00000203179 475 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm45122-201ENSMUST00000206376 784 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm19033-201ENSMUST00000208516 964 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm31166-201ENSMUST00000209326 288 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms