Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
H3f3aP84244 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm45172-201ENSMUST00000206054 1301 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
H3f3aP84244 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
H3f3aP84244 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Gm12110-201ENSMUST00000121601 579 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm24065-201ENSMUST00000157487 264 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Gm24940-201ENSMUST00000158326 108 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.8□□□□□ -1.64
H3f3aP84244 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm19029-201ENSMUST00000189923 564 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Mir409-201ENSMUST00000198153 79 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm29781-201ENSMUST00000203862 478 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Gm45026-201ENSMUST00000205292 833 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.8□□□□□ -1.64
H3f3aP84244 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm46192-201ENSMUST00000217894 326 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.8□□□□□ -1.64
H3f3aP84244 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.8□□□□□ -1.64
H3f3aP84244 AC164618.1-201ENSMUST00000225769 592 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 AC137950.3-201ENSMUST00000228250 246 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
H3f3aP84244 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
H3f3aP84244 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm23330-201ENSMUST00000082660 164 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm43386-201ENSMUST00000199654 4001 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.8□□□□□ -1.64
H3f3aP84244 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3f3aP84244 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H3f3aP84244 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
H3f3aP84244 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
H3f3aP84244 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
H3f3aP84244 Gm37262-201ENSMUST00000192816 1818 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H3f3aP84244 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC4.79□□□□□ -1.64
H3f3aP84244 Gm12683-201ENSMUST00000117528 415 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
H3f3aP84244 Gm12074-201ENSMUST00000120189 219 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm14563-201ENSMUST00000120571 354 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm15428-201ENSMUST00000121352 333 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H3f3aP84244 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.79□□□□□ -1.64
H3f3aP84244 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.79□□□□□ -1.64
H3f3aP84244 Gm24236-201ENSMUST00000157794 134 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm26489-201ENSMUST00000157880 264 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC4.79□□□□□ -1.64
H3f3aP84244 Gm8582-201ENSMUST00000164061 789 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
H3f3aP84244 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
H3f3aP84244 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H3f3aP84244 Gm8993-201ENSMUST00000182182 983 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm27225-201ENSMUST00000183833 557 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm27781-201ENSMUST00000185185 92 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm37681-201ENSMUST00000193880 727 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm9332-201ENSMUST00000198431 730 ntBASIC4.79□□□□□ -1.64
H3f3aP84244 Gm38670-201ENSMUST00000199248 77 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms