Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sf3b6P59708 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.86□□□□□ -1.47
Sf3b6P59708 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sf3b6P59708 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC5.86□□□□□ -1.47
Sf3b6P59708 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sf3b6P59708 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sf3b6P59708 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sf3b6P59708 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sf3b6P59708 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sf3b6P59708 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sf3b6P59708 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sf3b6P59708 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sf3b6P59708 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sf3b6P59708 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sf3b6P59708 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sf3b6P59708 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
Sf3b6P59708 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.85□□□□□ -1.47
Sf3b6P59708 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm14082-201ENSMUST00000118582 801 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm13486-201ENSMUST00000119910 282 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm14982-201ENSMUST00000121102 442 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm14038-201ENSMUST00000121500 807 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm13724-201ENSMUST00000122395 1155 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm23883-201ENSMUST00000122686 290 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC5.85□□□□□ -1.47
Sf3b6P59708 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm11545-201ENSMUST00000146507 375 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm24442-201ENSMUST00000157238 327 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm23591-201ENSMUST00000157663 286 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm6223-201ENSMUST00000178436 871 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm27026-201ENSMUST00000183003 892 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm27428-201ENSMUST00000184289 110 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm18875-201ENSMUST00000188563 882 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm37828-201ENSMUST00000192496 432 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm2221-201ENSMUST00000209342 418 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm7240-201ENSMUST00000220769 664 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm9293-201ENSMUST00000223096 306 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 AC154323.2-201ENSMUST00000226557 1151 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 AC154380.1-201ENSMUST00000226804 720 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm16415-201ENSMUST00000080097 489 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm24490-201ENSMUST00000083803 98 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Sf3b6P59708 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.85□□□□□ -1.47
Sf3b6P59708 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sf3b6P59708 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm18701-201ENSMUST00000188281 1536 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sf3b6P59708 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.84□□□□□ -1.47
Sf3b6P59708 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms