Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm18599-201ENSMUST00000206729 1125 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Gm4290-201ENSMUST00000206897 814 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Gm45870-201ENSMUST00000211269 601 ntBASIC8.17□□□□□ -1.1
Cux1P53564 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cux1P53564 AC154724.1-201ENSMUST00000225782 821 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Cux1P53564 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cux1P53564 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Cux1P53564 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
Cux1P53564 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cux1P53564 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Cux1P53564 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cux1P53564 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm37018-201ENSMUST00000192441 3869 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Cux1P53564 Gm13491-201ENSMUST00000118267 235 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm15791-201ENSMUST00000120365 319 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cux1P53564 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC8.16□□□□□ -1.1
Cux1P53564 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm18864-201ENSMUST00000194518 1051 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm5842-201ENSMUST00000195073 622 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm2623-201ENSMUST00000199229 286 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm6828-201ENSMUST00000207902 1186 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm25147-201ENSMUST00000083030 105 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm45838-201ENSMUST00000207355 2447 ntBASIC8.16□□□□□ -1.1
Cux1P53564 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cux1P53564 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Cux1P53564 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cux1P53564 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Cux1P53564 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cux1P53564 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cux1P53564 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cux1P53564 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.15□□□□□ -1.1
Cux1P53564 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Cux1P53564 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cux1P53564 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Cux1P53564 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
Cux1P53564 Gm25419-201ENSMUST00000104215 191 ntBASIC8.15□□□□□ -1.1
Cux1P53564 Gm22020-201ENSMUST00000104358 136 ntBASIC8.15□□□□□ -1.1
Cux1P53564 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Cux1P53564 Gm3931-201ENSMUST00000119038 455 ntBASIC8.15□□□□□ -1.1
Cux1P53564 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Esd-ps-201ENSMUST00000170684 847 ntBASIC8.15□□□□□ -1.1
Cux1P53564 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Gm27690-201ENSMUST00000184596 126 ntBASIC8.15□□□□□ -1.1
Cux1P53564 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cux1P53564 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cux1P53564 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC8.15□□□□□ -1.1
Cux1P53564 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Cux1P53564 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cux1P53564 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.15□□□□□ -1.1
Cux1P53564 Gm43502-201ENSMUST00000200263 2596 ntBASIC8.15□□□□□ -1.1
Cux1P53564 Gm37342-201ENSMUST00000194588 4965 ntBASIC8.15□□□□□ -1.1
Cux1P53564 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cux1P53564 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.11
Cux1P53564 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Cux1P53564 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Cux1P53564 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Cux1P53564 AC133076.2-201ENSMUST00000227678 3532 ntBASIC8.15□□□□□ -1.11
Cux1P53564 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Cux1P53564 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC8.14□□□□□ -1.11
Cux1P53564 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Cux1P53564 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cux1P53564 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cux1P53564 Gm25096-201ENSMUST00000104043 129 ntBASIC8.14□□□□□ -1.11
Cux1P53564 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC8.14□□□□□ -1.11
Cux1P53564 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Cux1P53564 Gm12328-201ENSMUST00000118611 197 ntBASIC8.14□□□□□ -1.11
Cux1P53564 Gm5383-201ENSMUST00000121177 617 ntBASIC8.14□□□□□ -1.11
Cux1P53564 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC8.14□□□□□ -1.11
Cux1P53564 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cux1P53564 Gm6673-201ENSMUST00000166114 700 ntBASIC8.14□□□□□ -1.11
Cux1P53564 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Cux1P53564 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Cux1P53564 Gm6223-201ENSMUST00000178436 871 ntBASIC8.14□□□□□ -1.11
Cux1P53564 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cux1P53564 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Cux1P53564 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cux1P53564 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Cux1P53564 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC8.14□□□□□ -1.11
Cux1P53564 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cux1P53564 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cux1P53564 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Cux1P53564 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Cux1P53564 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Cux1P53564 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms