Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Shmt1P50431 Gm20786-201ENSMUST00000212649 436 ntBASIC6.21□□□□□ -1.42
Shmt1P50431 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Shmt1P50431 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.21□□□□□ -1.42
Shmt1P50431 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC6.21□□□□□ -1.42
Shmt1P50431 Gm18409-202ENSMUST00000220105 529 ntBASIC6.21□□□□□ -1.42
Shmt1P50431 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.21□□□□□ -1.42
Shmt1P50431 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.21□□□□□ -1.42
Shmt1P50431 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Shmt1P50431 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Shmt1P50431 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Shmt1P50431 Mir375-201ENSMUST00000083682 64 ntBASIC6.21□□□□□ -1.42
Shmt1P50431 Gm26163-201ENSMUST00000083792 178 ntBASIC6.21□□□□□ -1.42
Shmt1P50431 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Shmt1P50431 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Shmt1P50431 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Shmt1P50431 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.21□□□□□ -1.42
Shmt1P50431 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Shmt1P50431 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Shmt1P50431 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Shmt1P50431 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Shmt1P50431 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Shmt1P50431 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Shmt1P50431 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Shmt1P50431 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Shmt1P50431 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.2□□□□□ -1.42
Shmt1P50431 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Shmt1P50431 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.2□□□□□ -1.42
Shmt1P50431 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Shmt1P50431 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm25313-201ENSMUST00000101817 116 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm7206-201ENSMUST00000117730 508 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Gm12488-201ENSMUST00000122449 499 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.2□□□□□ -1.42
Shmt1P50431 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm23280-201ENSMUST00000157905 139 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Gm16139-201ENSMUST00000160015 420 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Gm20549-201ENSMUST00000174804 429 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm23287-201ENSMUST00000179427 116 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Gm23143-201ENSMUST00000180137 116 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm38360-201ENSMUST00000195130 454 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Gm44432-201ENSMUST00000203342 938 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Gm5027-201ENSMUST00000206700 375 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 CT009765.2-201ENSMUST00000221331 392 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Shmt1P50431 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm24871-201ENSMUST00000083099 116 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Gm25099-201ENSMUST00000093716 116 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Rnu5g-201ENSMUST00000093721 116 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Shmt1P50431 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Shmt1P50431 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Shmt1P50431 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.2□□□□□ -1.42
Shmt1P50431 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Shmt1P50431 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Shmt1P50431 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.2□□□□□ -1.42
Shmt1P50431 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.2□□□□□ -1.42
Shmt1P50431 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.2□□□□□ -1.42
Shmt1P50431 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.19□□□□□ -1.42
Shmt1P50431 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.19□□□□□ -1.42
Shmt1P50431 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Shmt1P50431 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms