Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Sox6P40645 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sox6P40645 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.08□□□□□ -1.6
Sox6P40645 Gm9278-201ENSMUST00000205508 553 ntBASIC5.08□□□□□ -1.6
Sox6P40645 Gm45845-201ENSMUST00000207326 582 ntBASIC5.08□□□□□ -1.6
Sox6P40645 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.08□□□□□ -1.6
Sox6P40645 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.08□□□□□ -1.6
Sox6P40645 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.08□□□□□ -1.6
Sox6P40645 Gm5087-204ENSMUST00000225820 645 ntBASIC5.08□□□□□ -1.6
Sox6P40645 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox6P40645 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox6P40645 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox6P40645 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox6P40645 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Sox6P40645 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Sox6P40645 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sox6P40645 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox6P40645 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Sox6P40645 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox6P40645 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.08□□□□□ -1.6
Sox6P40645 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox6P40645 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox6P40645 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox6P40645 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox6P40645 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox6P40645 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox6P40645 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox6P40645 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Sox6P40645 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Sox6P40645 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox6P40645 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm15493-201ENSMUST00000119461 528 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm16423-201ENSMUST00000120078 947 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm6175-201ENSMUST00000121351 400 ntBASIC5.07□□□□□ -1.6
Sox6P40645 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Gm3076-201ENSMUST00000161613 451 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm17046-201ENSMUST00000168078 850 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm27160-201ENSMUST00000184837 199 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Gm37659-201ENSMUST00000194574 111 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm43148-201ENSMUST00000198237 520 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox6P40645 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox6P40645 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.07□□□□□ -1.6
Sox6P40645 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox6P40645 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.07□□□□□ -1.6
Sox6P40645 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Snora44-201ENSMUST00000082670 129 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sox6P40645 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.07□□□□□ -1.6
Sox6P40645 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox6P40645 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox6P40645 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox6P40645 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sox6P40645 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Sox6P40645 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.06□□□□□ -1.6
Sox6P40645 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Sox6P40645 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox6P40645 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox6P40645 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox6P40645 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sox6P40645 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox6P40645 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox6P40645 Gm11212-201ENSMUST00000118337 618 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Gm15741-201ENSMUST00000119401 754 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Gm12732-201ENSMUST00000121688 180 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Sox6P40645 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sox6P40645 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sox6P40645 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sox6P40645 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox6P40645 Gm9294-201ENSMUST00000165198 789 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sox6P40645 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.06□□□□□ -1.6
Sox6P40645 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sox6P40645 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sox6P40645 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Gm38131-201ENSMUST00000192449 430 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 115.3 ms