Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
P20040 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC4.82□□□□□ -1.64
P20040 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Gm45415-201ENSMUST00000209644 2074 ntBASIC4.82□□□□□ -1.64
P20040 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.82□□□□□ -1.64
P20040 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
P20040 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
P20040 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.81□□□□□ -1.64
P20040 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 AC124516.1-201ENSMUST00000221845 3544 ntBASIC4.81□□□□□ -1.64
P20040 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
P20040 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
P20040 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
P20040 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
P20040 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
P20040 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
P20040 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
P20040 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.81□□□□□ -1.64
P20040 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
P20040 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC4.81□□□□□ -1.64
P20040 Gm13245-201ENSMUST00000119646 260 ntBASIC4.81□□□□□ -1.64
P20040 Klra13-ps-201ENSMUST00000125813 802 ntBASIC4.81□□□□□ -1.64
P20040 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.81□□□□□ -1.64
P20040 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.81□□□□□ -1.64
P20040 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Gm26069-201ENSMUST00000157497 277 ntBASIC4.81□□□□□ -1.64
P20040 Gm23964-201ENSMUST00000157966 107 ntBASIC4.81□□□□□ -1.64
P20040 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
P20040 Gm17223-201ENSMUST00000171413 481 ntBASIC4.81□□□□□ -1.64
P20040 Gm22993-201ENSMUST00000175423 254 ntBASIC4.81□□□□□ -1.64
P20040 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Gm36999-201ENSMUST00000192756 1046 ntBASIC4.81□□□□□ -1.64
P20040 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.81□□□□□ -1.64
P20040 Mir219c-201ENSMUST00000199860 60 ntBASIC4.81□□□□□ -1.64
P20040 Gm18482-201ENSMUST00000202405 760 ntBASIC4.81□□□□□ -1.64
P20040 Gm45157-201ENSMUST00000208729 401 ntBASIC4.81□□□□□ -1.64
P20040 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC4.81□□□□□ -1.64
P20040 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Gm4012-201ENSMUST00000221504 581 ntBASIC4.81□□□□□ -1.64
P20040 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.81□□□□□ -1.64
P20040 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.81□□□□□ -1.64
P20040 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
P20040 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
P20040 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.81□□□□□ -1.64
P20040 AL670757.1-201ENSMUST00000223668 1959 ntBASIC4.81□□□□□ -1.64
P20040 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
P20040 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.81□□□□□ -1.64
P20040 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
P20040 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.8□□□□□ -1.64
P20040 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
P20040 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
P20040 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.8□□□□□ -1.64
P20040 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.8□□□□□ -1.64
P20040 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
P20040 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
P20040 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.8□□□□□ -1.64
P20040 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
P20040 Gm4989-201ENSMUST00000118711 749 ntBASIC4.8□□□□□ -1.64
P20040 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC4.8□□□□□ -1.64
P20040 Gm13077-201ENSMUST00000121941 484 ntBASIC4.8□□□□□ -1.64
P20040 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC4.8□□□□□ -1.64
P20040 Gm26169-201ENSMUST00000158420 135 ntBASIC4.8□□□□□ -1.64
P20040 Gm25489-201ENSMUST00000158727 141 ntBASIC4.8□□□□□ -1.64
P20040 Mir5110-201ENSMUST00000175537 87 ntBASIC4.8□□□□□ -1.64
P20040 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Gm37444-201ENSMUST00000193605 439 ntBASIC4.8□□□□□ -1.64
P20040 Gm37030-201ENSMUST00000194254 295 ntBASIC4.8□□□□□ -1.64
P20040 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
P20040 Gm43516-201ENSMUST00000196891 322 ntBASIC4.8□□□□□ -1.64
P20040 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.8□□□□□ -1.64
P20040 Gm43116-201ENSMUST00000199789 195 ntBASIC4.8□□□□□ -1.64
P20040 Gm43973-201ENSMUST00000203562 210 ntBASIC4.8□□□□□ -1.64
P20040 Gm4874-201ENSMUST00000203589 691 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms