Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm11484-201ENSMUST00000119808 338 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm15490-201ENSMUST00000119894 387 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm14831-201ENSMUST00000120253 409 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm11761-201ENSMUST00000121392 445 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm12110-201ENSMUST00000121601 579 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm23115-201ENSMUST00000158480 108 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm6872-201ENSMUST00000165001 700 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm25025-201ENSMUST00000175018 111 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Mir7653-201ENSMUST00000184358 61 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm27148-201ENSMUST00000185086 160 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm29159-201ENSMUST00000187969 379 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm37681-201ENSMUST00000193880 727 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm42652-201ENSMUST00000199073 614 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm4374-201ENSMUST00000204929 424 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm26163-201ENSMUST00000083792 178 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.84□□□□□ -1.47
Chmp6P0C0A3 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Chmp6P0C0A3 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.84□□□□□ -1.48
Chmp6P0C0A3 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.84□□□□□ -1.48
Chmp6P0C0A3 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Chmp6P0C0A3 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm14521-201ENSMUST00000119545 350 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm15152-201ENSMUST00000121540 394 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Mir1970-201ENSMUST00000157839 104 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm15812-201ENSMUST00000162331 748 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Mir7087-201ENSMUST00000184840 70 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm28883-201ENSMUST00000189256 369 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm37700-201ENSMUST00000192617 965 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm9317-201ENSMUST00000197055 862 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm43054-201ENSMUST00000199495 884 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm45700-201ENSMUST00000205866 347 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.83□□□□□ -1.48
Chmp6P0C0A3 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.83□□□□□ -1.48
Chmp6P0C0A3 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms