Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm37966-201ENSMUST00000193122 326 ntBASIC5.7□□□□□ -1.5
TnfP06804 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.7□□□□□ -1.5
TnfP06804 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.7□□□□□ -1.5
TnfP06804 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.7□□□□□ -1.5
TnfP06804 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.7□□□□□ -1.5
TnfP06804 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.7□□□□□ -1.5
TnfP06804 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.7□□□□□ -1.5
TnfP06804 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TnfP06804 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TnfP06804 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.7□□□□□ -1.5
TnfP06804 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.7□□□□□ -1.5
TnfP06804 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
TnfP06804 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TnfP06804 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.7□□□□□ -1.5
TnfP06804 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
TnfP06804 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TnfP06804 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.7□□□□□ -1.5
TnfP06804 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.69□□□□□ -1.5
TnfP06804 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
TnfP06804 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.69□□□□□ -1.5
TnfP06804 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TnfP06804 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.69□□□□□ -1.5
TnfP06804 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TnfP06804 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
TnfP06804 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.69□□□□□ -1.5
TnfP06804 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.69□□□□□ -1.5
TnfP06804 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TnfP06804 Gm26146-201ENSMUST00000104478 185 ntBASIC5.69□□□□□ -1.5
TnfP06804 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 Gm9836-201ENSMUST00000117132 216 ntBASIC5.69□□□□□ -1.5
TnfP06804 Gm7206-201ENSMUST00000117730 508 ntBASIC5.69□□□□□ -1.5
TnfP06804 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.69□□□□□ -1.5
TnfP06804 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TnfP06804 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TnfP06804 Gm23537-201ENSMUST00000157536 330 ntBASIC5.69□□□□□ -1.5
TnfP06804 Gm22529-201ENSMUST00000158817 123 ntBASIC5.69□□□□□ -1.5
TnfP06804 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.69□□□□□ -1.5
TnfP06804 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.69□□□□□ -1.5
TnfP06804 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
TnfP06804 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.69□□□□□ -1.5
TnfP06804 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.69□□□□□ -1.5
TnfP06804 Gm42542-201ENSMUST00000197978 268 ntBASIC5.69□□□□□ -1.5
TnfP06804 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TnfP06804 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.69□□□□□ -1.5
TnfP06804 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.69□□□□□ -1.5
TnfP06804 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TnfP06804 Gm23514-201ENSMUST00000082827 130 ntBASIC5.69□□□□□ -1.5
TnfP06804 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TnfP06804 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.69□□□□□ -1.5
TnfP06804 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.69□□□□□ -1.5
TnfP06804 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.69□□□□□ -1.5
TnfP06804 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TnfP06804 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TnfP06804 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.69□□□□□ -1.5
TnfP06804 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
TnfP06804 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Gm22194-201ENSMUST00000116869 95 ntBASIC5.68□□□□□ -1.5
TnfP06804 Gm14512-201ENSMUST00000117924 230 ntBASIC5.68□□□□□ -1.5
TnfP06804 Gm21990-201ENSMUST00000124692 383 ntBASIC5.68□□□□□ -1.5
TnfP06804 Scarna10-201ENSMUST00000158992 325 ntBASIC5.68□□□□□ -1.5
TnfP06804 Gm21909-201ENSMUST00000178260 439 ntBASIC5.68□□□□□ -1.5
TnfP06804 Gm37444-201ENSMUST00000193605 439 ntBASIC5.68□□□□□ -1.5
TnfP06804 Mir6516-201ENSMUST00000196236 110 ntBASIC5.68□□□□□ -1.5
TnfP06804 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Gm44330-201ENSMUST00000200106 143 ntBASIC5.68□□□□□ -1.5
TnfP06804 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
TnfP06804 Gm45246-201ENSMUST00000210820 367 ntBASIC5.68□□□□□ -1.5
TnfP06804 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
TnfP06804 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TnfP06804 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.68□□□□□ -1.5
TnfP06804 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.68□□□□□ -1.5
TnfP06804 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.68□□□□□ -1.5
TnfP06804 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TnfP06804 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TnfP06804 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TnfP06804 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms