Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.03□□□□□ -1.6
Rdh5O55240 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rdh5O55240 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Rdh5O55240 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Rdh5O55240 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Rdh5O55240 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm25758-201ENSMUST00000103987 129 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Gm22194-201ENSMUST00000116869 95 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm24477-201ENSMUST00000157438 103 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Gm17142-201ENSMUST00000164933 645 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Gm10087-201ENSMUST00000167650 330 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Rdh5O55240 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm27037-201ENSMUST00000182270 960 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Gm27225-201ENSMUST00000183833 557 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm37445-201ENSMUST00000195318 242 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Rdh5O55240 Mir188-201ENSMUST00000083464 68 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.02□□□□□ -1.61
Rdh5O55240 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rdh5O55240 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rdh5O55240 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.02□□□□□ -1.61
Rdh5O55240 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Rdh5O55240 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.01□□□□□ -1.61
Rdh5O55240 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.01□□□□□ -1.61
Rdh5O55240 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm24235-201ENSMUST00000104319 129 ntBASIC5.01□□□□□ -1.61
Rdh5O55240 Gm9429-201ENSMUST00000117804 868 ntBASIC5.01□□□□□ -1.61
Rdh5O55240 Gm12813-201ENSMUST00000119615 902 ntBASIC5.01□□□□□ -1.61
Rdh5O55240 Gm22106-201ENSMUST00000122544 127 ntBASIC5.01□□□□□ -1.61
Rdh5O55240 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm25824-201ENSMUST00000157092 121 ntBASIC5.01□□□□□ -1.61
Rdh5O55240 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.01□□□□□ -1.61
Rdh5O55240 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm29454-201ENSMUST00000190805 393 ntBASIC5.01□□□□□ -1.61
Rdh5O55240 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Rdh5O55240 Gm9317-201ENSMUST00000197055 862 ntBASIC5.01□□□□□ -1.61
Rdh5O55240 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 221.6 ms