Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
Hmgb3O54879 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm37735-201ENSMUST00000193995 1406 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm2223-201ENSMUST00000112099 1350 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm13590-201ENSMUST00000120183 1588 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm15981-201ENSMUST00000119196 457 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm14369-201ENSMUST00000121355 285 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm23883-201ENSMUST00000122686 290 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm24179-201ENSMUST00000158925 127 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm24175-201ENSMUST00000158931 129 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm17907-201ENSMUST00000173150 710 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm22411-201ENSMUST00000175462 126 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm22002-201ENSMUST00000175622 125 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 n-R5s209-201ENSMUST00000179494 119 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm21542-201ENSMUST00000182307 993 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Rps12l1-201ENSMUST00000183090 399 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm27820-201ENSMUST00000183628 175 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm28934-201ENSMUST00000186491 346 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm21577-201ENSMUST00000190823 697 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm5694-201ENSMUST00000195648 641 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm18009-201ENSMUST00000203239 1016 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm45422-201ENSMUST00000211476 246 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC4.28□□□□□ -1.72
Hmgb3O54879 AC132121.1-201ENSMUST00000220774 332 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC4.28□□□□□ -1.72
Hmgb3O54879 AC113198.1-201ENSMUST00000226353 832 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm23302-201ENSMUST00000082710 100 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Hmgb3O54879 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.28□□□□□ -1.72
Hmgb3O54879 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb3O54879 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hmgb3O54879 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Hmgb3O54879 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm15300-201ENSMUST00000122324 279 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm16330-201ENSMUST00000128324 297 ntBASIC4.27□□□□□ -1.73
Hmgb3O54879 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb3O54879 Gm22804-201ENSMUST00000158052 101 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms