Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Gm44235-201ENSMUST00000204312 3058 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Gm22899-201ENSMUST00000104540 131 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Mir7012-201ENSMUST00000183900 64 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Gm37760-201ENSMUST00000194726 3841 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Gm18100-201ENSMUST00000200897 452 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Gm46369-201ENSMUST00000221577 401 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 AC156576.2-202ENSMUST00000222525 411 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 AC125539.2-202ENSMUST00000227983 587 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 AC125539.2-201ENSMUST00000228339 753 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 n-R5s88-201ENSMUST00000083173 118 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc180J3QNE4 Gm44424-201ENSMUST00000203438 1826 ntBASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Gm11447-201ENSMUST00000118983 858 ntBASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Gm11278-201ENSMUST00000121002 997 ntBASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Gm21909-201ENSMUST00000178260 439 ntBASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Gm2080-201ENSMUST00000211299 1573 ntBASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Gm44901-201ENSMUST00000208157 3977 ntBASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Ccdc180J3QNE4 Gm23948-201ENSMUST00000104030 132 ntBASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Gm15168-201ENSMUST00000121057 316 ntBASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Gm26098-201ENSMUST00000157247 288 ntBASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Gm22160-201ENSMUST00000158405 328 ntBASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Gm45228-201ENSMUST00000206585 352 ntBASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 AC131117.2-203ENSMUST00000225886 950 ntBASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Gm22220-201ENSMUST00000082671 149 ntBASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Gm44723-201ENSMUST00000207369 4000 ntBASIC9.77□□□□□ -0.84
Ccdc180J3QNE4 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 AC131329.1-201ENSMUST00000221204 3487 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gm5925-201ENSMUST00000105016 1497 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 AC103672.3-201ENSMUST00000227649 3243 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gm42725-201ENSMUST00000199296 4193 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gm37342-201ENSMUST00000194588 4965 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gm3267-201ENSMUST00000118671 473 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gm25179-201ENSMUST00000122632 128 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gm28567-201ENSMUST00000190270 693 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gm37044-201ENSMUST00000193531 693 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gm38369-201ENSMUST00000195101 693 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 CT030238.1-201ENSMUST00000228393 442 ntBASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Ccdc180J3QNE4 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Gm37049-201ENSMUST00000194356 1983 ntBASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Gm9085-201ENSMUST00000119994 1072 ntBASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Gm37445-201ENSMUST00000195318 242 ntBASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Gm18791-201ENSMUST00000204611 726 ntBASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Prl7a1-203ENSMUST00000224852 1283 ntBASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Gm23626-201ENSMUST00000082458 133 ntBASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Ccdc180J3QNE4 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms