Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm24235-201ENSMUST00000104319 129 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm13579-201ENSMUST00000118519 517 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm19124-201ENSMUST00000191041 832 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm44571-201ENSMUST00000208092 533 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm18587-201ENSMUST00000213736 841 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm23508-201ENSMUST00000083079 72 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
H2afb2S4R1M3 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm25595-201ENSMUST00000102273 97 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm6134-201ENSMUST00000117265 171 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm26489-201ENSMUST00000157880 264 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Scarna13-201ENSMUST00000158164 275 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm26172-201ENSMUST00000158421 134 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm25363-201ENSMUST00000158850 245 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm3076-201ENSMUST00000161613 451 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm44370-201ENSMUST00000175436 112 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Mir6417-201ENSMUST00000183815 116 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm37187-201ENSMUST00000193425 341 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Mir6906-201ENSMUST00000198998 58 ntBASIC5.31□□□□□ -1.56
H2afb2S4R1M3 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H2afb2S4R1M3 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms