Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Mir292-201ENSMUST00000104847 82 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm14335-201ENSMUST00000119165 810 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm22916-201ENSMUST00000157616 119 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm20545-201ENSMUST00000174739 210 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm28883-201ENSMUST00000189256 369 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm31306-201ENSMUST00000197517 508 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm43116-201ENSMUST00000199789 195 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm6477-201ENSMUST00000217098 764 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm5087-204ENSMUST00000225820 645 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm11737-201ENSMUST00000118713 468 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm6427-201ENSMUST00000118721 979 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm12005-201ENSMUST00000121451 379 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm12732-201ENSMUST00000121688 180 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm26170-201ENSMUST00000158419 148 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm9294-201ENSMUST00000165198 789 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Mir5110-201ENSMUST00000175537 87 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm27887-201ENSMUST00000184367 102 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm7733-201ENSMUST00000199038 919 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm45525-201ENSMUST00000210800 389 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm45870-201ENSMUST00000211269 601 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm33178-201ENSMUST00000212090 257 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.17□□□□□ -1.58
Trim3Q9R1R2 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms