Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm26923-201ENSMUST00000182615 996 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm27004-201ENSMUST00000183300 727 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Mir6238-201ENSMUST00000184140 129 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm18407-201ENSMUST00000192126 790 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm38213-201ENSMUST00000193203 173 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm8412-201ENSMUST00000077493 440 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm22351-201ENSMUST00000083925 107 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 AC132336.1-201ENSMUST00000222844 1740 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm7927-201ENSMUST00000118818 880 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm14375-201ENSMUST00000119490 855 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm25971-201ENSMUST00000158953 286 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm23777-201ENSMUST00000158994 259 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm17907-201ENSMUST00000173150 710 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm28788-201ENSMUST00000189717 375 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm29558-201ENSMUST00000190134 375 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm36986-201ENSMUST00000195320 353 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm42452-201ENSMUST00000199749 617 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm17984-201ENSMUST00000205286 859 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm45228-201ENSMUST00000206585 352 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm45710-201ENSMUST00000212847 215 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Mir3068-201ENSMUST00000083004 136 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ddx56Q9D0R4 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx56Q9D0R4 Gm10936-201ENSMUST00000105264 252 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms