Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm15400-201ENSMUST00000118944 601 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm14520-201ENSMUST00000119258 387 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm25824-201ENSMUST00000157092 121 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm27355-201ENSMUST00000185045 128 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm29124-201ENSMUST00000186576 452 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm28188-201ENSMUST00000190483 236 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm8826-201ENSMUST00000193161 948 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm18427-201ENSMUST00000195422 515 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 AC153532.2-201ENSMUST00000219753 3844 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm19073-201ENSMUST00000219978 555 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm5087-204ENSMUST00000225820 645 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm23927-201ENSMUST00000082466 215 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Mir188-201ENSMUST00000083464 68 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Smc1aQ9CU62 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Mir7006-201ENSMUST00000183624 69 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Mir7687-201ENSMUST00000184722 59 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm27985-201ENSMUST00000185112 378 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm29813-201ENSMUST00000195856 447 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm8039-201ENSMUST00000204758 712 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm18205-201ENSMUST00000209215 841 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm32526-201ENSMUST00000221878 981 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm6474-201ENSMUST00000223250 699 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Smc1aQ9CU62 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Smc1aQ9CU62 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms