Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm27528-201ENSMUST00000183544 205 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm15206-201ENSMUST00000119143 454 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Mir6412-201ENSMUST00000184477 97 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm37828-201ENSMUST00000192496 432 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm44852-201ENSMUST00000207950 369 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm24581-201ENSMUST00000103962 133 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm24792-201ENSMUST00000104286 128 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm22456-201ENSMUST00000082578 125 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm37040-201ENSMUST00000191740 1824 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm22326-201ENSMUST00000158897 351 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm18181-201ENSMUST00000190670 736 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm44237-201ENSMUST00000205183 936 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm10652-201ENSMUST00000199790 2622 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 C78859-201ENSMUST00000212800 5943 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm23279-201ENSMUST00000157912 97 ntBASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdh23Q99PF4 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm11270-201ENSMUST00000117685 471 ntBASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm6650-201ENSMUST00000166710 614 ntBASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm21909-201ENSMUST00000178260 439 ntBASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdh23Q99PF4 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms