Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm43696-201ENSMUST00000199385 6071 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Smc5-206ENSMUST00000226111 3265 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm14485-201ENSMUST00000119489 493 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm11484-201ENSMUST00000119808 338 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm4660-201ENSMUST00000131499 403 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm23662-201ENSMUST00000158046 111 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm27024-201ENSMUST00000182561 755 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm29509-201ENSMUST00000185716 321 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm37203-201ENSMUST00000191618 385 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm15233-201ENSMUST00000118747 400 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm26489-201ENSMUST00000157880 264 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm4742-201ENSMUST00000200261 771 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm2961-201ENSMUST00000211074 772 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm4510-201ENSMUST00000218265 427 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Cchcr1Q8K2I2 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cchcr1Q8K2I2 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cchcr1Q8K2I2 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Cchcr1Q8K2I2 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cchcr1Q8K2I2 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cchcr1Q8K2I2 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC6.27□□□□□ -1.41
Cchcr1Q8K2I2 Gm13681-201ENSMUST00000117925 210 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms