Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Brf1Q8CFK2 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brf1Q8CFK2 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Brf1Q8CFK2 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brf1Q8CFK2 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Brf1Q8CFK2 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Brf1Q8CFK2 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Brf1Q8CFK2 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Brf1Q8CFK2 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brf1Q8CFK2 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Brf1Q8CFK2 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm11737-201ENSMUST00000118713 468 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm15194-201ENSMUST00000120453 434 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm14620-201ENSMUST00000120656 383 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm16563-201ENSMUST00000162673 423 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm18415-201ENSMUST00000177464 647 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm29474-201ENSMUST00000187688 379 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm28396-201ENSMUST00000190309 379 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm38201-201ENSMUST00000192143 387 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm37213-201ENSMUST00000193077 586 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm7733-201ENSMUST00000199038 919 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm43973-201ENSMUST00000203562 210 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm4874-201ENSMUST00000203589 691 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm45734-201ENSMUST00000211916 411 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm19174-201ENSMUST00000216944 956 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm5087-204ENSMUST00000225820 645 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Olfr480-201ENSMUST00000071658 1029 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.77□□□□□ -1.33
Brf1Q8CFK2 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.77□□□□□ -1.33
Brf1Q8CFK2 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm4989-201ENSMUST00000118711 749 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm2199-201ENSMUST00000119065 874 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm24719-201ENSMUST00000157520 110 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm23587-201ENSMUST00000157658 84 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm23819-201ENSMUST00000158744 109 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm23774-201ENSMUST00000158990 131 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm3170-201ENSMUST00000168753 850 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Mir3095-201ENSMUST00000175552 87 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm3348-201ENSMUST00000177813 850 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm6055-201ENSMUST00000180532 378 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm27024-201ENSMUST00000182561 755 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Mir703-201ENSMUST00000197105 109 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm6520-201ENSMUST00000200636 410 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm43967-201ENSMUST00000203787 301 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm18996-201ENSMUST00000214851 755 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 AC127302.1-201ENSMUST00000215973 1111 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm22807-201ENSMUST00000082737 129 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Gm25810-201ENSMUST00000082752 108 ntBASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Brf1Q8CFK2 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms