Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm18397-201ENSMUST00000176704 587 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm28186-201ENSMUST00000187447 679 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm28429-201ENSMUST00000188521 363 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm19002-201ENSMUST00000192649 1012 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm6543-201ENSMUST00000197353 808 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm5309-201ENSMUST00000197416 677 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm43478-201ENSMUST00000200381 292 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm19186-201ENSMUST00000219922 333 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm6474-201ENSMUST00000223250 699 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm23102-201ENSMUST00000083724 116 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm22864-201ENSMUST00000083950 130 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm37589-201ENSMUST00000193609 3994 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm5594-201ENSMUST00000172712 1429 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm44193-201ENSMUST00000204822 2523 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm37429-201ENSMUST00000193807 1799 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm22194-201ENSMUST00000116869 95 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm12387-201ENSMUST00000118573 955 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm15780-201ENSMUST00000121283 935 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm23279-201ENSMUST00000157912 97 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm2966-201ENSMUST00000166052 481 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm17204-201ENSMUST00000167936 478 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28604-201ENSMUST00000186629 484 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28566-201ENSMUST00000186714 484 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28194-201ENSMUST00000187412 484 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28886-202ENSMUST00000187889 484 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29576-201ENSMUST00000188020 678 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28554-202ENSMUST00000189175 484 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm29213-202ENSMUST00000189703 484 ntBASIC7.82□□□□□ -1.16
Usp40Q8BWR4 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms