Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gm3715-201ENSMUST00000172308 617 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gm18343-201ENSMUST00000172802 604 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gm8993-201ENSMUST00000182182 983 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Mir6952-201ENSMUST00000185092 61 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gm28871-201ENSMUST00000186191 687 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gm29474-201ENSMUST00000187688 379 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gm4083-201ENSMUST00000207158 451 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Chmp2bQ8BJF9 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Chmp2bQ8BJF9 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.59□□□□□ -1.52
Chmp2bQ8BJF9 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.59□□□□□ -1.52
Chmp2bQ8BJF9 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.59□□□□□ -1.52
Chmp2bQ8BJF9 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Chmp2bQ8BJF9 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Chmp2bQ8BJF9 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.59□□□□□ -1.52
Chmp2bQ8BJF9 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Chmp2bQ8BJF9 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm25117-201ENSMUST00000157194 144 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm26355-201ENSMUST00000158220 105 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Mir6361-201ENSMUST00000185079 101 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm29663-201ENSMUST00000186962 853 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm44319-201ENSMUST00000196974 93 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm6366-201ENSMUST00000198766 826 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm4602-201ENSMUST00000203198 308 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm22971-201ENSMUST00000083305 97 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Chmp2bQ8BJF9 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Chmp2bQ8BJF9 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Chmp2bQ8BJF9 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.57□□□□□ -1.52
Chmp2bQ8BJF9 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Chmp2bQ8BJF9 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Chmp2bQ8BJF9 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.57□□□□□ -1.52
Chmp2bQ8BJF9 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Chmp2bQ8BJF9 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.57□□□□□ -1.52
Chmp2bQ8BJF9 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Chmp2bQ8BJF9 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Chmp2bQ8BJF9 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms