Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm18350-201ENSMUST00000187395 955 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm29474-201ENSMUST00000187688 379 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm29640-201ENSMUST00000187972 278 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm28396-201ENSMUST00000190309 379 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm43631-201ENSMUST00000202011 369 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm3257-201ENSMUST00000207217 675 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm18904-201ENSMUST00000218756 329 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 AC158392.1-201ENSMUST00000223720 1069 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm5436-201ENSMUST00000058103 643 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.62□□□□□ -1.35
Ddx55Q6ZPL9 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm9432-201ENSMUST00000117810 759 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm15428-201ENSMUST00000121352 333 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm13024-201ENSMUST00000121756 718 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm20545-201ENSMUST00000174739 210 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm22923-201ENSMUST00000174952 110 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm26318-201ENSMUST00000176507 96 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm25019-201ENSMUST00000179732 110 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm27158-201ENSMUST00000183813 238 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm28976-201ENSMUST00000188070 144 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm44048-201ENSMUST00000204531 361 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx55Q6ZPL9 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Mir546-201ENSMUST00000102105 121 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm16089-201ENSMUST00000117679 336 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm15361-201ENSMUST00000119320 444 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm6175-201ENSMUST00000121351 400 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm23777-201ENSMUST00000158994 259 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Mir7087-201ENSMUST00000184840 70 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm29516-201ENSMUST00000190402 468 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm29107-201ENSMUST00000190910 347 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm42454-201ENSMUST00000196805 1181 ntBASIC6.6□□□□□ -1.35
Ddx55Q6ZPL9 Gm3148-201ENSMUST00000203594 612 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms