Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC6.24□□□□□ -1.41
Nup98Q6PFD9 Gm36986-201ENSMUST00000195320 353 ntBASIC6.24□□□□□ -1.41
Nup98Q6PFD9 Gm44919-201ENSMUST00000208587 1073 ntBASIC6.24□□□□□ -1.41
Nup98Q6PFD9 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC6.24□□□□□ -1.41
Nup98Q6PFD9 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.24□□□□□ -1.41
Nup98Q6PFD9 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nup98Q6PFD9 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nup98Q6PFD9 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Nup98Q6PFD9 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.24□□□□□ -1.41
Nup98Q6PFD9 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.24□□□□□ -1.41
Nup98Q6PFD9 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.24□□□□□ -1.41
Nup98Q6PFD9 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nup98Q6PFD9 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nup98Q6PFD9 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm26814-201ENSMUST00000181178 4149 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm24160-201ENSMUST00000104594 126 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm25179-201ENSMUST00000122632 128 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm25293-201ENSMUST00000122792 285 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm22312-201ENSMUST00000158005 130 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm3531-201ENSMUST00000162698 489 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm2497-201ENSMUST00000189539 601 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 AC154239.1-201ENSMUST00000228565 406 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.23□□□□□ -1.41
Nup98Q6PFD9 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm13213-201ENSMUST00000119668 474 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm22569-201ENSMUST00000175545 124 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm18728-201ENSMUST00000186155 753 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm28468-201ENSMUST00000188536 615 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm9685-201ENSMUST00000211275 538 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm23274-201ENSMUST00000104056 130 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm25419-201ENSMUST00000104215 191 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm14985-201ENSMUST00000118693 786 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm22160-201ENSMUST00000158405 328 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm5511-201ENSMUST00000189380 802 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm5842-201ENSMUST00000195073 622 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm44259-201ENSMUST00000204996 298 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm6906-201ENSMUST00000218014 569 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm2645-201ENSMUST00000223516 547 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.22□□□□□ -1.41
Nup98Q6PFD9 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms