Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 Gm12073-201ENSMUST00000117382 524 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm15400-201ENSMUST00000118944 601 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm13991-201ENSMUST00000120190 648 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm25782-201ENSMUST00000122526 289 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 Gm25826-201ENSMUST00000157090 137 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm22724-201ENSMUST00000158091 127 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm25445-201ENSMUST00000158996 299 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm16139-201ENSMUST00000160015 420 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm18199-201ENSMUST00000173820 835 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm18953-201ENSMUST00000175694 300 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm7745-201ENSMUST00000182235 973 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Vis1-201ENSMUST00000183957 201 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm8641-201ENSMUST00000186995 826 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ClpbQ60649 Gm38280-201ENSMUST00000192610 158 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm37375-201ENSMUST00000193859 387 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm37002-201ENSMUST00000194560 373 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm37385-201ENSMUST00000195223 387 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ClpbQ60649 Gm4742-201ENSMUST00000200261 771 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm43798-201ENSMUST00000202056 394 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ClpbQ60649 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.5□□□□□ -1.53
ClpbQ60649 AC159622.1-201ENSMUST00000221004 554 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.5□□□□□ -1.53
ClpbQ60649 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ClpbQ60649 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ClpbQ60649 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ClpbQ60649 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ClpbQ60649 Gm6104-201ENSMUST00000078030 603 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ClpbQ60649 Gm25005-201ENSMUST00000083812 156 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ClpbQ60649 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ClpbQ60649 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ClpbQ60649 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ClpbQ60649 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
ClpbQ60649 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ClpbQ60649 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
ClpbQ60649 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.5□□□□□ -1.53
ClpbQ60649 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ClpbQ60649 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ClpbQ60649 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
ClpbQ60649 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ClpbQ60649 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ClpbQ60649 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
ClpbQ60649 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.5□□□□□ -1.53
ClpbQ60649 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ClpbQ60649 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ClpbQ60649 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ClpbQ60649 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ClpbQ60649 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ClpbQ60649 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ClpbQ60649 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ClpbQ60649 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ClpbQ60649 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ClpbQ60649 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ClpbQ60649 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.49□□□□□ -1.53
ClpbQ60649 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ClpbQ60649 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm14885-201ENSMUST00000117969 496 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Gm5073-201ENSMUST00000118222 820 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Gm4342-201ENSMUST00000118982 367 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Gm12768-201ENSMUST00000120055 759 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm3160-201ENSMUST00000128343 607 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.49□□□□□ -1.53
ClpbQ60649 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm23539-201ENSMUST00000157537 224 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm20401-201ENSMUST00000173717 212 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.49□□□□□ -1.53
ClpbQ60649 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
ClpbQ60649 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms