Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm37755-201ENSMUST00000195880 2179 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm44178-201ENSMUST00000205229 2930 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Grik1-210ENSMUST00000228034 2708 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 AC153143.2-201ENSMUST00000220999 1804 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gm15193-201ENSMUST00000120224 865 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gm22523-201ENSMUST00000158696 100 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gm28016-201ENSMUST00000184594 196 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gm45750-201ENSMUST00000211966 354 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gm5373-201ENSMUST00000212113 1050 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 AC163660.1-201ENSMUST00000223696 818 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Snora44-201ENSMUST00000082670 129 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gm9923-201ENSMUST00000217785 1836 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gm29670-201ENSMUST00000190228 2491 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gm38699-201ENSMUST00000221301 1740 ntBASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim41Q5NCC3 Gm18796-201ENSMUST00000190440 1767 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm44121-201ENSMUST00000205169 2006 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm44777-201ENSMUST00000205941 4052 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm23739-201ENSMUST00000102295 108 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm12900-201ENSMUST00000120919 573 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm16248-201ENSMUST00000124238 243 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm27522-201ENSMUST00000183949 230 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm28023-201ENSMUST00000184556 60 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm27825-201ENSMUST00000184586 60 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm29563-201ENSMUST00000187249 496 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm3351-201ENSMUST00000193454 505 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Nras-ps2-201ENSMUST00000195269 178 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Gm6929-201ENSMUST00000210930 468 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 AC105950.1-201ENSMUST00000222637 408 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Trim41Q5NCC3 AC167192.3-201ENSMUST00000224096 1567 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 AC160115.1-201ENSMUST00000224678 1574 ntBASIC11.84□□□□□ -0.51
Trim41Q5NCC3 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm3555-201ENSMUST00000160287 1395 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm44022-201ENSMUST00000203708 5429 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm13006-201ENSMUST00000118683 214 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm14269-201ENSMUST00000120455 306 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm25904-201ENSMUST00000158491 143 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm9593-201ENSMUST00000166034 469 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm8419-201ENSMUST00000189886 412 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm44060-201ENSMUST00000204440 410 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm45171-201ENSMUST00000206360 736 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm7692-201ENSMUST00000213534 409 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm17849-201ENSMUST00000219788 853 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 AC119894.1-201ENSMUST00000220399 350 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 AC126554.4-201ENSMUST00000221055 409 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm15182-201ENSMUST00000120832 1676 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm44021-201ENSMUST00000203055 3516 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Gm44652-201ENSMUST00000208648 2854 ntBASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim41Q5NCC3 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms