Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col8a1Q00780 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm19936-201ENSMUST00000216414 838 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm5702-201ENSMUST00000185629 2469 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col8a1Q00780 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm15715-201ENSMUST00000118032 283 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm13640-201ENSMUST00000118445 264 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm13367-201ENSMUST00000119955 796 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm11876-201ENSMUST00000120002 269 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm14725-201ENSMUST00000120324 828 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm12881-201ENSMUST00000121191 203 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.54□□□□□ -1.52
Col8a1Q00780 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm25824-201ENSMUST00000157092 121 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm25981-201ENSMUST00000157921 295 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm25459-201ENSMUST00000157953 114 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm23505-201ENSMUST00000158989 130 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm20612-201ENSMUST00000176318 236 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm24417-201ENSMUST00000178123 79 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm24653-201ENSMUST00000178541 79 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm25934-201ENSMUST00000178642 79 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Mir6951-201ENSMUST00000183910 75 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm5334-201ENSMUST00000187472 720 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm28190-201ENSMUST00000189766 722 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm43212-201ENSMUST00000198208 394 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Gm43384-201ENSMUST00000200569 637 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 BC049739-201ENSMUST00000202626 660 ntBASIC5.54□□□□□ -1.52
Col8a1Q00780 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms