Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PrkdcP97313 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PrkdcP97313 Gm14878-201ENSMUST00000118167 293 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm15603-201ENSMUST00000119252 492 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm15227-201ENSMUST00000121844 399 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Mir1945-201ENSMUST00000157919 78 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PrkdcP97313 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm32453-201ENSMUST00000204183 456 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm18016-201ENSMUST00000216119 801 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PrkdcP97313 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PrkdcP97313 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PrkdcP97313 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PrkdcP97313 AC158981.2-201ENSMUST00000227565 1537 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
PrkdcP97313 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PrkdcP97313 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PrkdcP97313 Gm25169-201ENSMUST00000104190 129 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm12717-201ENSMUST00000118427 983 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PrkdcP97313 Gm23781-201ENSMUST00000157940 308 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC3.57□□□□□ -1.84
PrkdcP97313 Gm6650-201ENSMUST00000166710 614 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm43444-201ENSMUST00000198123 291 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 AC158803.3-201ENSMUST00000220024 211 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm26165-201ENSMUST00000083791 138 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm22868-201ENSMUST00000083955 164 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm42494-201ENSMUST00000196515 3051 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PrkdcP97313 AC190403.1-201ENSMUST00000224515 1325 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 AC162467.3-201ENSMUST00000219716 2172 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm43085-201ENSMUST00000202859 3132 ntBASIC3.57□□□□□ -1.84
PrkdcP97313 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm14610-201ENSMUST00000118358 966 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm1866-201ENSMUST00000120701 477 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PrkdcP97313 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm25965-201ENSMUST00000157170 93 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Esd-ps-201ENSMUST00000170684 847 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm27528-201ENSMUST00000183544 205 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 AC121804.1-201ENSMUST00000221016 394 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PrkdcP97313 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 AC154640.4-201ENSMUST00000226647 4640 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm11698-201ENSMUST00000117948 455 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm17081-201ENSMUST00000167363 478 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm4842-201ENSMUST00000183237 835 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm43350-201ENSMUST00000196382 711 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC3.56□□□□□ -1.84
PrkdcP97313 Snora52-201ENSMUST00000082732 137 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PrkdcP97313 Mir199a-2-201ENSMUST00000093618 110 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm10845-202ENSMUST00000228217 3389 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm43654-201ENSMUST00000200664 3417 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm43887-201ENSMUST00000204727 3186 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
PrkdcP97313 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PrkdcP97313 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm45632-201ENSMUST00000211532 1888 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm25419-201ENSMUST00000104215 191 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm12007-201ENSMUST00000120978 597 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm23865-201ENSMUST00000157723 97 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm44237-201ENSMUST00000205183 936 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms