Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.82□□□□□ -1.64
H3f3aP84244 Gm29201-201ENSMUST00000189120 431 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 Gm28883-201ENSMUST00000189256 369 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 Gm6543-201ENSMUST00000197353 808 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Gm45700-201ENSMUST00000205866 347 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Gm45343-201ENSMUST00000210452 828 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 Gm45874-201ENSMUST00000212423 346 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 AC123061.2-201ENSMUST00000226234 802 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
H3f3aP84244 n-R5s36-201ENSMUST00000082998 119 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC4.82□□□□□ -1.64
H3f3aP84244 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
H3f3aP84244 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
H3f3aP84244 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
H3f3aP84244 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
H3f3aP84244 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.82□□□□□ -1.64
H3f3aP84244 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
H3f3aP84244 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
H3f3aP84244 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.82□□□□□ -1.64
H3f3aP84244 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3f3aP84244 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H3f3aP84244 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H3f3aP84244 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H3f3aP84244 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm22370-201ENSMUST00000102422 83 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H3f3aP84244 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm11825-201ENSMUST00000120710 736 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm13533-201ENSMUST00000121104 177 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm26086-201ENSMUST00000157902 263 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm22326-201ENSMUST00000158897 351 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28064-201ENSMUST00000185639 858 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm2914-201ENSMUST00000186120 328 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28943-201ENSMUST00000186187 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28736-201ENSMUST00000186257 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm29401-201ENSMUST00000186690 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm29178-204ENSMUST00000186784 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28589-201ENSMUST00000186991 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28936-201ENSMUST00000187153 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm29121-201ENSMUST00000187611 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28243-201ENSMUST00000187801 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28844-202ENSMUST00000187977 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm29058-201ENSMUST00000189510 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm29624-201ENSMUST00000190018 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28780-201ENSMUST00000190223 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28969-211ENSMUST00000190992 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm28990-207ENSMUST00000191219 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm36468-201ENSMUST00000192119 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm31572-201ENSMUST00000193341 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm30175-201ENSMUST00000194173 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Gm30858-201ENSMUST00000195516 615 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC4.81□□□□□ -1.64
H3f3aP84244 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC4.81□□□□□ -1.64
H3f3aP84244 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 AV026068-237ENSMUST00000226075 572 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H3f3aP84244 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H3f3aP84244 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H3f3aP84244 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.81□□□□□ -1.64
H3f3aP84244 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
H3f3aP84244 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.81□□□□□ -1.64
H3f3aP84244 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3f3aP84244 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms