Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 AC160999.1-201ENSMUST00000225675 810 ntBASIC6.11□□□□□ -1.43
SgcbP82349 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.11□□□□□ -1.43
SgcbP82349 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.11□□□□□ -1.43
SgcbP82349 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SgcbP82349 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Gm26107-201ENSMUST00000083972 107 ntBASIC6.11□□□□□ -1.43
SgcbP82349 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
SgcbP82349 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SgcbP82349 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.11□□□□□ -1.43
SgcbP82349 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.11□□□□□ -1.43
SgcbP82349 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.11□□□□□ -1.43
SgcbP82349 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.11□□□□□ -1.43
SgcbP82349 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.11□□□□□ -1.43
SgcbP82349 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.11□□□□□ -1.43
SgcbP82349 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
SgcbP82349 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SgcbP82349 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.11□□□□□ -1.43
SgcbP82349 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SgcbP82349 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.11□□□□□ -1.43
SgcbP82349 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.1□□□□□ -1.43
SgcbP82349 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SgcbP82349 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SgcbP82349 Gm14755-201ENSMUST00000118037 384 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Gm12242-201ENSMUST00000118824 738 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Gm12016-201ENSMUST00000119079 681 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Gm6987-201ENSMUST00000119319 428 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Gm7071-201ENSMUST00000120458 462 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Gm12900-201ENSMUST00000120919 573 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SgcbP82349 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Gm24545-201ENSMUST00000158651 85 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Gm22668-201ENSMUST00000158716 260 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
SgcbP82349 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Trbv10-201ENSMUST00000168322 289 ntBASIC6.1□□□□□ -1.43
SgcbP82349 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SgcbP82349 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SgcbP82349 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 Gm21839-201ENSMUST00000179536 378 ntBASIC6.1□□□□□ -1.43
SgcbP82349 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SgcbP82349 Gm27360-201ENSMUST00000183487 80 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Mir7093-201ENSMUST00000184195 101 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 Gm37689-201ENSMUST00000193139 275 ntBASIC6.1□□□□□ -1.43
SgcbP82349 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC6.1□□□□□ -1.43
SgcbP82349 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SgcbP82349 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.1□□□□□ -1.43
SgcbP82349 Gm30646-201ENSMUST00000207662 180 ntBASIC6.1□□□□□ -1.43
SgcbP82349 AC069561.3-201ENSMUST00000217321 114 ntBASIC6.1□□□□□ -1.43
SgcbP82349 AC139638.1-201ENSMUST00000218027 364 ntBASIC6.1□□□□□ -1.43
SgcbP82349 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.1□□□□□ -1.43
SgcbP82349 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.1□□□□□ -1.43
SgcbP82349 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.1□□□□□ -1.43
SgcbP82349 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.1□□□□□ -1.43
SgcbP82349 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
SgcbP82349 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SgcbP82349 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SgcbP82349 Gm22810-201ENSMUST00000082741 158 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.1□□□□□ -1.43
SgcbP82349 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SgcbP82349 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms