Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdh11P55288 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Cdh11P55288 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Cdh11P55288 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Cdh11P55288 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdh11P55288 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdh11P55288 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm26106-201ENSMUST00000157254 228 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Gm25363-201ENSMUST00000158850 245 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Gm16125-201ENSMUST00000159003 339 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdh11P55288 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Mir7235-201ENSMUST00000183796 56 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Vis1-201ENSMUST00000183957 201 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
Cdh11P55288 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm44494-201ENSMUST00000196760 129 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Gm43655-201ENSMUST00000197367 222 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm34149-201ENSMUST00000203547 304 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Cdh11P55288 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Gm46191-201ENSMUST00000218899 433 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdh11P55288 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm2099-201ENSMUST00000220979 412 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.08□□□□□ -1.6
Cdh11P55288 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Cdh11P55288 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdh11P55288 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdh11P55288 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdh11P55288 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdh11P55288 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdh11P55288 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdh11P55288 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdh11P55288 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdh11P55288 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdh11P55288 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Cdh11P55288 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdh11P55288 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdh11P55288 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Gm12677-201ENSMUST00000118668 426 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Gm11699-201ENSMUST00000119016 401 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Gm12731-201ENSMUST00000120932 268 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm22867-201ENSMUST00000157499 109 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Gm24186-201ENSMUST00000157983 127 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Gm15970-201ENSMUST00000160623 834 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdh11P55288 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm18350-201ENSMUST00000187395 955 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdh11P55288 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm18413-201ENSMUST00000221573 655 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdh11P55288 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdh11P55288 Gm16335-201ENSMUST00000077495 309 ntBASIC5.07□□□□□ -1.6
Cdh11P55288 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms