Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cdx2P43241 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx2P43241 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cdx2P43241 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cdx2P43241 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdx2P43241 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx2P43241 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx2P43241 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx2P43241 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.22□□□□□ -1.57
Cdx2P43241 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx2P43241 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx2P43241 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Cdx2P43241 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Cdx2P43241 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.21□□□□□ -1.57
Cdx2P43241 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.21□□□□□ -1.57
Cdx2P43241 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cdx2P43241 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cdx2P43241 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cdx2P43241 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cdx2P43241 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cdx2P43241 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cdx2P43241 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.21□□□□□ -1.58
Cdx2P43241 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cdx2P43241 Gm22778-201ENSMUST00000104090 128 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Gm24160-201ENSMUST00000104594 126 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cdx2P43241 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.21□□□□□ -1.58
Cdx2P43241 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Gm23872-201ENSMUST00000175432 77 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.21□□□□□ -1.58
Cdx2P43241 Gm28567-201ENSMUST00000190270 693 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.21□□□□□ -1.58
Cdx2P43241 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Gm37044-201ENSMUST00000193531 693 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Gm38369-201ENSMUST00000195101 693 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Gm9173-201ENSMUST00000198054 400 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
Cdx2P43241 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cdx2P43241 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cdx2P43241 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cdx2P43241 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx2P43241 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.21□□□□□ -1.58
Cdx2P43241 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.21□□□□□ -1.58
Cdx2P43241 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx2P43241 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Cdx2P43241 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx2P43241 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Cdx2P43241 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Cdx2P43241 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
Cdx2P43241 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Cdx2P43241 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx2P43241 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx2P43241 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx2P43241 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Gm7206-201ENSMUST00000117730 508 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Gm14485-201ENSMUST00000119489 493 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Gm7973-201ENSMUST00000122107 488 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Gm25179-201ENSMUST00000122632 128 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Gm25176-201ENSMUST00000122640 125 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Gm23883-201ENSMUST00000122686 290 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx2P43241 Gm3242-201ENSMUST00000171273 485 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Gm17223-201ENSMUST00000171413 481 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx2P43241 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Cdx2P43241 Gm19029-201ENSMUST00000189923 564 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Gm42542-201ENSMUST00000197978 268 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.2□□□□□ -1.58
Cdx2P43241 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx2P43241 Gm5027-201ENSMUST00000206700 375 ntBASIC5.2□□□□□ -1.58
Cdx2P43241 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx2P43241 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms