Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.46□□□□□ -1.54
HttP42859 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
HttP42859 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
HttP42859 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.46□□□□□ -1.54
HttP42859 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HttP42859 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Gm12994-201ENSMUST00000119601 447 ntBASIC5.45□□□□□ -1.54
HttP42859 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.45□□□□□ -1.54
HttP42859 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.45□□□□□ -1.54
HttP42859 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.45□□□□□ -1.54
HttP42859 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HttP42859 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.45□□□□□ -1.54
HttP42859 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.45□□□□□ -1.54
HttP42859 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 Gm6011-201ENSMUST00000211736 1796 ntBASIC5.45□□□□□ -1.54
HttP42859 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HttP42859 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HttP42859 Gm14046-201ENSMUST00000119389 509 ntBASIC5.45□□□□□ -1.54
HttP42859 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.45□□□□□ -1.54
HttP42859 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HttP42859 Gm18382-201ENSMUST00000194394 582 ntBASIC5.45□□□□□ -1.54
HttP42859 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.45□□□□□ -1.54
HttP42859 Mir20a-201ENSMUST00000083508 107 ntBASIC5.45□□□□□ -1.54
HttP42859 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC5.45□□□□□ -1.54
HttP42859 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.45□□□□□ -1.54
HttP42859 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HttP42859 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
HttP42859 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
HttP42859 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.45□□□□□ -1.54
HttP42859 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.45□□□□□ -1.54
HttP42859 Gm11790-201ENSMUST00000119569 455 ntBASIC5.45□□□□□ -1.54
HttP42859 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.45□□□□□ -1.54
HttP42859 Gm18462-201ENSMUST00000208112 417 ntBASIC5.45□□□□□ -1.54
HttP42859 Gm34272-201ENSMUST00000208886 253 ntBASIC5.45□□□□□ -1.54
HttP42859 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.45□□□□□ -1.54
HttP42859 Gm26165-201ENSMUST00000083791 138 ntBASIC5.45□□□□□ -1.54
HttP42859 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.45□□□□□ -1.54
HttP42859 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HttP42859 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.45□□□□□ -1.54
HttP42859 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HttP42859 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HttP42859 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.44□□□□□ -1.54
HttP42859 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Gm14610-201ENSMUST00000118358 966 ntBASIC5.44□□□□□ -1.54
HttP42859 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Gm26219-201ENSMUST00000175216 71 ntBASIC5.44□□□□□ -1.54
HttP42859 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.44□□□□□ -1.54
HttP42859 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.44□□□□□ -1.54
HttP42859 Mir323-201ENSMUST00000083683 86 ntBASIC5.44□□□□□ -1.54
HttP42859 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.44□□□□□ -1.54
HttP42859 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
HttP42859 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Gm13363-201ENSMUST00000122008 522 ntBASIC5.44□□□□□ -1.54
HttP42859 Gm15038-201ENSMUST00000122144 296 ntBASIC5.44□□□□□ -1.54
HttP42859 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Gm19807-201ENSMUST00000173971 667 ntBASIC5.44□□□□□ -1.54
HttP42859 Trbv11-201ENSMUST00000194354 260 ntBASIC5.44□□□□□ -1.54
HttP42859 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.44□□□□□ -1.54
HttP42859 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.44□□□□□ -1.54
HttP42859 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HttP42859 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HttP42859 Gm23593-201ENSMUST00000104309 120 ntBASIC5.43□□□□□ -1.54
HttP42859 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms