Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cxcl12P40224 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cxcl12P40224 Gm45876-201ENSMUST00000212698 2709 ntBASIC5.62□□□□□ -1.51
Cxcl12P40224 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.62□□□□□ -1.51
Cxcl12P40224 AC139754.2-201ENSMUST00000218037 1455 ntBASIC5.62□□□□□ -1.51
Cxcl12P40224 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cxcl12P40224 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cxcl12P40224 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cxcl12P40224 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cxcl12P40224 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.62□□□□□ -1.51
Cxcl12P40224 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cxcl12P40224 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.62□□□□□ -1.51
Cxcl12P40224 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cxcl12P40224 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Cxcl12P40224 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm14046-201ENSMUST00000119389 509 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm15840-201ENSMUST00000122099 943 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm23164-201ENSMUST00000175084 111 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm36986-201ENSMUST00000195320 353 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm42975-201ENSMUST00000200612 1491 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm18924-201ENSMUST00000211929 316 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cxcl12P40224 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm17915-201ENSMUST00000222077 548 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 AC124581.3-201ENSMUST00000224270 1624 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cxcl12P40224 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm23972-201ENSMUST00000083322 165 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.61□□□□□ -1.51
Cxcl12P40224 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.61□□□□□ -1.51
Cxcl12P40224 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cxcl12P40224 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Cxcl12P40224 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm6062-201ENSMUST00000120462 631 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm4852-201ENSMUST00000121202 729 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm15905-201ENSMUST00000137042 298 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm15501-202ENSMUST00000140687 625 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm26170-201ENSMUST00000158419 148 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Rab26os-201ENSMUST00000176215 477 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms