Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sftpa1P35242 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sftpa1P35242 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sftpa1P35242 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.22□□□□□ -1.57
Sftpa1P35242 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.22□□□□□ -1.57
Sftpa1P35242 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sftpa1P35242 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.22□□□□□ -1.57
Sftpa1P35242 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.22□□□□□ -1.57
Sftpa1P35242 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.22□□□□□ -1.57
Sftpa1P35242 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sftpa1P35242 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
Sftpa1P35242 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.21□□□□□ -1.57
Sftpa1P35242 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.21□□□□□ -1.57
Sftpa1P35242 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.21□□□□□ -1.57
Sftpa1P35242 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Sftpa1P35242 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Sftpa1P35242 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Sftpa1P35242 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm4234-201ENSMUST00000119747 714 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm11825-201ENSMUST00000120710 736 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm11925-201ENSMUST00000121375 535 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm11990-201ENSMUST00000121505 897 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm12094-201ENSMUST00000121781 472 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm23467-201ENSMUST00000157127 159 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm23954-201ENSMUST00000157213 353 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm26355-201ENSMUST00000158220 105 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm20674-201ENSMUST00000177452 369 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Mir6400-201ENSMUST00000184870 92 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.21□□□□□ -1.58
Sftpa1P35242 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm43467-201ENSMUST00000197441 437 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Supt4b-201ENSMUST00000214434 351 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm18618-201ENSMUST00000222211 473 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Snord15b-201ENSMUST00000083032 145 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sftpa1P35242 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sftpa1P35242 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.21□□□□□ -1.58
Sftpa1P35242 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.21□□□□□ -1.58
Sftpa1P35242 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sftpa1P35242 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sftpa1P35242 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Sftpa1P35242 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sftpa1P35242 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sftpa1P35242 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sftpa1P35242 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm11550-201ENSMUST00000118210 699 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm14610-201ENSMUST00000118358 966 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm11774-201ENSMUST00000118601 293 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm11975-201ENSMUST00000118772 481 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm25432-201ENSMUST00000158284 66 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm5946-201ENSMUST00000182340 970 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.2□□□□□ -1.58
Sftpa1P35242 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.2□□□□□ -1.58
Sftpa1P35242 Gm19739-201ENSMUST00000195941 153 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms